X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=collectsharedcommand.h;h=327ce5d28832dbe7f25d69f6c0755f6e931c747d;hb=1b4b18b3e6fa1436b7cc6dcb14c749ac1ae1bdd8;hp=139a0cff7dfb3220db697d582ae037a99a3b0d98;hpb=7b3c9ca940891c1b20b3b7ec13e05d7e7b316b63;p=mothur.git

diff --git a/collectsharedcommand.h b/collectsharedcommand.h
index 139a0cf..327ce5d 100644
--- a/collectsharedcommand.h
+++ b/collectsharedcommand.h
@@ -27,7 +27,12 @@ class CollectSharedCommand : public Command {
 	
 public:
 	CollectSharedCommand(string);	
+	CollectSharedCommand();	
 	~CollectSharedCommand();
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();	
 	void help();
 	
@@ -42,13 +47,14 @@ private:
 	ValidCalculators* validCalculator;
 	Collect* cCurve;
 	vector<Display*> cDisplays;
-	int freq;
+	float freq;
 	string format;
 
 	bool abort, allLines, all;
 	set<string> labels; //holds labels to be used
-	string label, calc, groups;
-	vector<string>  Estimators, Groups;
+	string label, calc, groups, outputDir;
+	vector<string>  Estimators, Groups, outputNames;
+	map<string, vector<string> > outputTypes;
 
 
 };