X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=collectsharedcommand.cpp;h=ec35dd601e75abd3ea7b65e32aabcaa1c13b1c90;hb=2657127a3e1f3b5463f2b3a3b49bc19843f5c9d2;hp=e989233c7b86c3efae39d5a7f1b5b0541a365bd5;hpb=9ca2caadbeac83bb84b3330d9204b1b659d62941;p=mothur.git diff --git a/collectsharedcommand.cpp b/collectsharedcommand.cpp index e989233..ec35dd6 100644 --- a/collectsharedcommand.cpp +++ b/collectsharedcommand.cpp @@ -19,7 +19,17 @@ #include "sharedsorest.h" #include "sharedthetayc.h" #include "sharedthetan.h" +#include "sharedkstest.h" +#include "sharedbdiversity.h" #include "sharednseqs.h" +#include "sharedochiai.h" +#include "sharedanderbergs.h" +#include "sharedkulczynski.h" +#include "sharedkulczynskicody.h" +#include "sharedlennon.h" +#include "sharedmorisitahorn.h" +#include "sharedbraycurtis.h" + //********************************************************************************************************************** @@ -57,10 +67,27 @@ CollectSharedCommand::CollectSharedCommand(){ cDisplays.push_back(new CollectDisplay(new SharedThetaYC(), new SharedOneColumnFile(fileNameRoot+"shared.thetayc"))); }else if (globaldata->Estimators[i] == "sharedthetan") { cDisplays.push_back(new CollectDisplay(new SharedThetaN(), new SharedOneColumnFile(fileNameRoot+"shared.thetan"))); + }else if (globaldata->Estimators[i] == "sharedkstest") { + cDisplays.push_back(new CollectDisplay(new SharedKSTest(), new SharedOneColumnFile(fileNameRoot+"shared.kstest"))); + }else if (globaldata->Estimators[i] == "sharedbdiversity") { + cDisplays.push_back(new CollectDisplay(new SharedBDiversity(), new SharedOneColumnFile(fileNameRoot+"shared.bdiversity"))); }else if (globaldata->Estimators[i] == "sharednseqs") { cDisplays.push_back(new CollectDisplay(new SharedNSeqs(), new SharedOneColumnFile(fileNameRoot+"shared.nseqs"))); + }else if (globaldata->Estimators[i] == "sharedochiai") { + cDisplays.push_back(new CollectDisplay(new SharedOchiai(), new SharedOneColumnFile(fileNameRoot+"shared.ochiai"))); + }else if (globaldata->Estimators[i] == "sharedanderberg") { + cDisplays.push_back(new CollectDisplay(new SharedAnderberg(), new SharedOneColumnFile(fileNameRoot+"shared.anderberg"))); + }else if (globaldata->Estimators[i] == "sharedkulczynski") { + cDisplays.push_back(new CollectDisplay(new SharedKulczynski(), new SharedOneColumnFile(fileNameRoot+"shared.kulczynski"))); + }else if (globaldata->Estimators[i] == "sharedkulczynskicody") { + cDisplays.push_back(new CollectDisplay(new SharedKulczynskiCody(), new SharedOneColumnFile(fileNameRoot+"shared.kulczynskicody"))); + }else if (globaldata->Estimators[i] == "sharedlennon") { + cDisplays.push_back(new CollectDisplay(new SharedLennon(), new SharedOneColumnFile(fileNameRoot+"shared.lennon"))); + }else if (globaldata->Estimators[i] == "sharedmorisitahorn") { + cDisplays.push_back(new CollectDisplay(new SharedMorHorn(), new SharedOneColumnFile(fileNameRoot+"shared.morisitahorn"))); + }else if (globaldata->Estimators[i] == "sharedbraycurtis") { + cDisplays.push_back(new CollectDisplay(new SharedBrayCurtis(), new SharedOneColumnFile(fileNameRoot+"shared.braycurtis"))); } - } }