X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=collectcommand.h;h=7c5ec4278bf75e95043b28ea68eda32e54b17837;hb=a8f5a612bba54ceb74e17efc027d3a7f5aa93c9a;hp=9c24339d3d3745a1b2a6591af023c0fbb7ab3901;hpb=f18d75f9c996cb619a5051a7664620c0c5ae05fb;p=mothur.git

diff --git a/collectcommand.h b/collectcommand.h
index 9c24339..7c5ec42 100644
--- a/collectcommand.h
+++ b/collectcommand.h
@@ -12,10 +12,10 @@
 #include "command.hpp"
 #include "ordervector.hpp"
 #include "inputdata.h"
-//#include "groupmap.h"
+#include "groupmap.h"
 #include "collect.h"
 #include "display.h"
-#include "readmatrix.hpp"
+#include "readotu.h"
 #include "validcalculator.h"
 
 /*The collect() command:
@@ -43,13 +43,14 @@ public:
 	
 private:
 	GlobalData* globaldata;
-	ReadMatrix* read;
+	ReadOTUFile* read;
 	OrderVector* order;
+	OrderVector* lastOrder;
 	InputData* input;
 	Collect* cCurve;
 	ValidCalculators* validCalculator;
 	vector<Display*> cDisplays;
-	int freq, abund;
+	int freq, abund, size;
 
 };