X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=collectcommand.cpp;h=000f85d1d91f3922766f024d71dc157640b2eabe;hb=d53f63d7e0d9c3feeb8ded5a74e6c150fae50fe9;hp=c716732474da857a38bee138931b4a769cca4aa1;hpb=5e7c1cf6a6dd289a90d27c0eef7eb4675b5e17b7;p=mothur.git

diff --git a/collectcommand.cpp b/collectcommand.cpp
index c716732..000f85d 100644
--- a/collectcommand.cpp
+++ b/collectcommand.cpp
@@ -10,6 +10,7 @@
 #include "collectcommand.h"
 #include "ace.h"
 #include "sobs.h"
+#include "nseqs.h"
 #include "chao1.h"
 #include "bootstrap.h"
 #include "simpson.h"
@@ -35,8 +36,10 @@ CollectCommand::CollectCommand(){
 					cDisplays.push_back(new CollectDisplay(new Sobs(), new OneColumnFile(fileNameRoot+"sobs")));
 				}else if (globaldata->Estimators[i] == "chao") { 
 					cDisplays.push_back(new CollectDisplay(new Chao1(), new ThreeColumnFile(fileNameRoot+"chao")));
+				}else if (globaldata->Estimators[i] == "nseqs") { 
+					cDisplays.push_back(new CollectDisplay(new NSeqs(), new OneColumnFile(fileNameRoot+"nseqs")));
 				}else if (globaldata->Estimators[i] == "ace") { 
-				convert(globaldata->getAbund(), abund);
+					convert(globaldata->getAbund(), abund);
 					cDisplays.push_back(new CollectDisplay(new Ace(abund), new ThreeColumnFile(fileNameRoot+"ace")));
 				}else if (globaldata->Estimators[i] == "jack") { 
 					cDisplays.push_back(new CollectDisplay(new Jackknife(), new ThreeColumnFile(fileNameRoot+"jack")));
@@ -110,7 +113,6 @@ int CollectCommand::execute(){
 		for(i = globaldata->labels.begin(); i != globaldata->labels.end(); ++i)
 			if(orderList.count(*i) == 0)
 				cout << "'" << *i << "'" << " is not a valid label.\n";
-		globaldata->clearLabels();
 		for(int i=0;i<cDisplays.size();i++){	delete cDisplays[i];	}	
 		return 0;
 	}