X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=collect.cpp;fp=collect.cpp;h=ee46ef5928d8be156af4e1875304b633539e5147;hb=c196b6b4768ccb84955d773ff0f22e4994d1ba7b;hp=d109ca0540c01a78ca7e08c5c0e7bf6dfad85d90;hpb=dc08123b7f14e2305e5bb2b3a8fcef96fc829b07;p=mothur.git

diff --git a/collect.cpp b/collect.cpp
index d109ca0..ee46ef5 100644
--- a/collect.cpp
+++ b/collect.cpp
@@ -111,7 +111,9 @@ try {
 	
                         //calculate at 0 and the given increment
                         if((i == 0) || (i+1) % increment == 0){
+
 								//how many comparisons to make i.e. for group a, b, c = ab, ac, bc.
+
                                 int n = 1;
                                 for (int k = 0; k < (lookup.size() - 1); k++) { // pass cdd each set of groups to commpare
                                         for (int l = n; l < lookup.size(); l++) {