X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=code_ruby%2Flib%2Fmaasha%2Fseq.rb;h=c22ecec8948a0230079aacd05af1e552a168819e;hb=eb15b4040e0ceba1c3df40b7f0a597c469771cee;hp=5e4d1b528027b9af8c2a4d80b9a26696f71ceb12;hpb=801e0b96e0ac9ffb02f193e8432c021c92cbf78c;p=biopieces.git

diff --git a/code_ruby/lib/maasha/seq.rb b/code_ruby/lib/maasha/seq.rb
index 5e4d1b5..c22ecec 100644
--- a/code_ruby/lib/maasha/seq.rb
+++ b/code_ruby/lib/maasha/seq.rb
@@ -294,8 +294,8 @@ class Seq
     raise SeqError, "Missing seq_name" if self.seq_name.nil? or self.seq_name == ''
     raise SeqError, "Missing seq"      if self.seq.nil?      or self.seq.empty?
 
-    seq_name = self.seq_name.to_s
-    seq      = self.seq.to_s
+    seq_name = self.seq_name
+    seq      = self.seq.dup
 
     unless wrap.nil?
       seq.gsub!(/(.{#{wrap}})/) do |match|
@@ -681,6 +681,8 @@ class Seq
 
             orfs << [subseq, pos_beg, pos_end + 3]
           end
+
+          break
         end
 
         pos_end += 1