X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=code_ruby%2Flib%2Fmaasha%2Fseq%2Fassemble.rb;h=7b02d03a61a827782a802ade399ebd5c378105cb;hb=bc7b9f68c35624bd8a605e35f9a15dfbf66ae37d;hp=dffbf11ee43f25b1fcf684d72c86d7a95ead62f4;hpb=ddbb577ec991c2a466b6c1230cc241f649753f09;p=biopieces.git

diff --git a/code_ruby/lib/maasha/seq/assemble.rb b/code_ruby/lib/maasha/seq/assemble.rb
index dffbf11..7b02d03 100644
--- a/code_ruby/lib/maasha/seq/assemble.rb
+++ b/code_ruby/lib/maasha/seq/assemble.rb
@@ -64,6 +64,8 @@ class Assemble
           entry_overlap = @entry1[-1 * overlap .. -1]
         end
 
+        entry_left.seq.upcase!
+        entry_right.seq.upcase!
         entry_merged          = entry_left + entry_overlap + entry_right
         entry_merged.seq_name = @entry1.seq_name + ":overlap=#{overlap}:hamming=#{hamming_dist}"