X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=code_ruby%2Flib%2Fmaasha%2Flocator.rb;h=5996663b0a4cf1c6137bbfd89e1a0d362572f0c5;hb=b982cc677363d7458963b610ec53bf2c4f7476a9;hp=a2a0db0eff6036f988f8d530e8e497367453d814;hpb=471889816720cc10e68f9b9a31a5fc9b6732a23b;p=biopieces.git

diff --git a/code_ruby/lib/maasha/locator.rb b/code_ruby/lib/maasha/locator.rb
index a2a0db0..5996663 100644
--- a/code_ruby/lib/maasha/locator.rb
+++ b/code_ruby/lib/maasha/locator.rb
@@ -107,10 +107,10 @@ class Locator
           int_beg = $1.to_i - 1
           int_end = $2.to_i - 1
 
-          newseq = Seq.new(nil, @seq.seq[int_beg...int_end], "dna")
+          newseq = Seq.new(nil, @seq.seq[int_beg..int_end], "dna")
 
 					unless newseq.seq.nil?
-						newseq.revcomp if comp
+						newseq.reverse!.complement! if comp
 
 						@subseq.seq << (order ? " " + newseq.seq : newseq.seq)
 					end
@@ -120,7 +120,7 @@ class Locator
           newseq = Seq.new(nil, @seq.seq[pos], "dna")
 
 					unless newseq.seq.nil?
-          	newseq.revcomp if comp 
+          	newseq.reverse!.complement! if comp 
 
           	@subseq.seq << (order ? " " + newseq.seq : newseq.seq)
 					end