X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clustersplitcommand.cpp;fp=clustersplitcommand.cpp;h=b5dc9692f0f7afefabae27676b9aa61491c048f1;hb=a935b75dd890da5ae7f09e5e6179f90ab2955348;hp=95693cc420a7e55d5c9a96a102e3d9e55ad0221c;hpb=d1c97b8c04bb75faca1e76ffad60b37a4d789d3d;p=mothur.git

diff --git a/clustersplitcommand.cpp b/clustersplitcommand.cpp
index 95693cc..b5dc969 100644
--- a/clustersplitcommand.cpp
+++ b/clustersplitcommand.cpp
@@ -1174,7 +1174,7 @@ string ClusterSplitCommand::clusterClassicFile(string thisDistFile, string thisN
             cluster->readPhylipFile(thisDistFile, nameMap);
 		}else if (countfile != "") {
             ct = new CountTable();
-            ct->readTable(thisNamefile, false);
+            ct->readTable(thisNamefile, false, false);
             cluster->readPhylipFile(thisDistFile, ct);
         }
         tag = cluster->getTag();
@@ -1302,7 +1302,7 @@ string ClusterSplitCommand::clusterFile(string thisDistFile, string thisNamefile
             read->read(nameMap);
 		}else if (countfile != "") {
             ct = new CountTable();
-            ct->readTable(thisNamefile, false);
+            ct->readTable(thisNamefile, false, false);
             read->read(ct);
         }else { read->read(nameMap); }