X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clusterfragmentscommand.h;h=ee25fb30da91c4ab338b0b173bcf05a6f1689c81;hb=bd27c2b0612942815b7417c79f7ee41f669a2a34;hp=e3d861a8a1477c0edf71ae7208c86560ceb56860;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d;p=mothur.git diff --git a/clusterfragmentscommand.h b/clusterfragmentscommand.h index e3d861a..ee25fb3 100644 --- a/clusterfragmentscommand.h +++ b/clusterfragmentscommand.h @@ -38,8 +38,9 @@ public: vector setParameters(); string getCommandName() { return "cluster.fragments"; } string getCommandCategory() { return "Sequence Processing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Cluster.fragments"; } string getDescription() { return "creates a namesfile with sequences that are a fragment of a larger sequence"; }