X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clusterfragmentscommand.h;h=c322529f3bedf95600a8b30e0ac013be2870d290;hb=5a4ac4f954c4b4445bcee272f1f8220ddcc9c1e4;hp=882ab332f1cf8f2dae29ce3436373ebeca4c5b4a;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git

diff --git a/clusterfragmentscommand.h b/clusterfragmentscommand.h
index 882ab33..c322529 100644
--- a/clusterfragmentscommand.h
+++ b/clusterfragmentscommand.h
@@ -37,7 +37,10 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "cluster.fragments";		}
 	string getCommandCategory()		{ return "Sequence Processing";		}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
+	string getCitation() { return "http://www.mothur.org/wiki/Cluster.fragments"; }
+	string getDescription()		{ return "creates a namesfile with sequences that are a fragment of a larger sequence"; }
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }