X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clusterdoturcommand.h;h=ec2f083e987e47f3125f381bd0c1199307dbdaf8;hb=f06b339c5fc4b6d1b9d2a08fe16bf7670bf7aeb4;hp=e76332cbd9f7c82afed60ddfc48f84c0489798bb;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git diff --git a/clusterdoturcommand.h b/clusterdoturcommand.h index e76332c..ec2f083 100644 --- a/clusterdoturcommand.h +++ b/clusterdoturcommand.h @@ -27,8 +27,10 @@ public: vector setParameters(); string getCommandName() { return "cluster.classic"; } string getCommandCategory() { return "Clustering"; } - string getHelpString(); - string getCitation() { return "http://www.mothur.org/wiki/Cluster.classic"; } + string getOutputFileNameTag(string, string); + string getHelpString(); + string getCitation() { return "Schloss PD, Handelsman J (2005). Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-6. \nhttp://www.mothur.org/wiki/Cluster.classic"; } + string getDescription() { return "cluster your sequences into OTUs using DOTUR’s method"; } int execute(); void help() { m->mothurOut(getHelpString()); }