X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clustercommand.h;h=c8e01749de20baac9fe523e9cbf0b5f158b35941;hb=fc9c3ccee1fba93d9df72c26baa22628268fe79f;hp=ad9fe85d9977f4c3ffb74d65bfa58ecc995f710c;hpb=1b9d0a66e4737f31d16824fe93944880b9edc530;p=mothur.git

diff --git a/clustercommand.h b/clustercommand.h
index ad9fe85..c8e0174 100644
--- a/clustercommand.h
+++ b/clustercommand.h
@@ -29,7 +29,7 @@
 class ClusterCommand : public Command {
 	
 public:
-	ClusterCommand(string);	
+	ClusterCommand(string);
 	~ClusterCommand();
 	int execute();	
 	void help();
@@ -43,9 +43,9 @@ private:
 	RAbundVector oldRAbund;
 	ListVector oldList;
 
-	bool abort;
+	bool abort, hard;
 
-	string method, fileroot, tag;
+	string method, fileroot, tag, outputDir;
 	double cutoff;
 	string showabund, timing;
 	int precision, length;
@@ -56,6 +56,7 @@ private:
 	unsigned long loops;
 	
 	void printData(string label);
+	vector<string> outputNames;
 };
 
 #endif