X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clustercommand.h;h=7349961e252104c93cf26942d79b44f11ba7c0f5;hb=8e67e9de1b200106bea5a468ac02125954656499;hp=368760ac9465c231674b84de2ffffa5b714382f2;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git

diff --git a/clustercommand.h b/clustercommand.h
index 368760a..7349961 100644
--- a/clustercommand.h
+++ b/clustercommand.h
@@ -32,9 +32,12 @@ public:
 	~ClusterCommand();
 	
 	vector<string> setParameters();
-	string getCommandName()			{ return "cluster";					}
-	string getCommandCategory()		{ return "OTU-Based Approaches";	}
+	string getCommandName()			{ return "cluster";		}
+	string getCommandCategory()		{ return "Clustering";	}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
+	string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol. \nhttp://www.mothur.org/wiki/Cluster"; }
+	string getDescription()		{ return "cluster your sequences into OTUs using a distance matrix"; }
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }