X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clustercommand.h;h=7349961e252104c93cf26942d79b44f11ba7c0f5;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=bda61403ced8b4b7051edd69d22623c14184bc54;hpb=0e051b4cfda410b0d441da6ff2f96d4bbe1d9e5a;p=mothur.git

diff --git a/clustercommand.h b/clustercommand.h
index bda6140..7349961 100644
--- a/clustercommand.h
+++ b/clustercommand.h
@@ -34,7 +34,10 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "cluster";		}
 	string getCommandCategory()		{ return "Clustering";	}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
+	string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol. \nhttp://www.mothur.org/wiki/Cluster"; }
+	string getDescription()		{ return "cluster your sequences into OTUs using a distance matrix"; }
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }