X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clustercommand.h;h=268ec315a81e1bbbcbd80051986703f3e02f03d4;hb=36a6b02cf7f09d2bc34376b588944a9ca73429c5;hp=368760ac9465c231674b84de2ffffa5b714382f2;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git diff --git a/clustercommand.h b/clustercommand.h index 368760a..268ec31 100644 --- a/clustercommand.h +++ b/clustercommand.h @@ -32,9 +32,11 @@ public: ~ClusterCommand(); vector setParameters(); - string getCommandName() { return "cluster"; } - string getCommandCategory() { return "OTU-Based Approaches"; } + string getCommandName() { return "cluster"; } + string getCommandCategory() { return "Clustering"; } string getHelpString(); + string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol. \nhttp://www.mothur.org/wiki/Cluster"; } + string getDescription() { return "cluster your sequences into OTUs using a distance matrix"; } int execute(); void help() { m->mothurOut(getHelpString()); }