X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clearmemorycommand.cpp;fp=clearmemorycommand.cpp;h=abdc5558ae1aa26ab7c2d21454f8ff0696802ad1;hb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;hp=0000000000000000000000000000000000000000;hpb=1b73ff67c83892a025e597dabd9df6fe7b58206a;p=mothur.git

diff --git a/clearmemorycommand.cpp b/clearmemorycommand.cpp
new file mode 100644
index 0000000..abdc555
--- /dev/null
+++ b/clearmemorycommand.cpp
@@ -0,0 +1,70 @@
+/*
+ *  clearmemorycommand.cpp
+ *  Mothur
+ *
+ *  Created by westcott on 7/6/11.
+ *  Copyright 2011 Schloss Lab. All rights reserved.
+ *
+ */
+
+#include "clearmemorycommand.h"
+#include "referencedb.h"
+
+//**********************************************************************************************************************
+vector<string> ClearMemoryCommand::setParameters(){	
+	try {
+		vector<string> myArray;
+		return myArray;
+	}
+	catch(exception& e) {
+		m->errorOut(e, "ClearMemoryCommand", "setParameters");
+		exit(1);
+	}
+}
+//**********************************************************************************************************************
+string ClearMemoryCommand::getHelpString(){	
+	try {
+		string helpString = "";
+		helpString += "The clear.memory command removes saved reference data from memory.\n";
+		helpString += "The clear.memory command should be in the following format: clear.memory().\n";
+		return helpString;
+	}
+	catch(exception& e) {
+		m->errorOut(e, "ClearMemoryCommand", "getHelpString");
+		exit(1);
+	}
+}
+//**********************************************************************************************************************
+
+ClearMemoryCommand::ClearMemoryCommand(string option)  {
+	try {
+		abort = false; calledHelp = false;   
+		
+		//allow user to run help
+		if(option == "help") { help(); abort = true; calledHelp = true; }
+		else if(option == "citation") { citation(); abort = true; calledHelp = true;}
+	}
+	catch(exception& e) {
+		m->errorOut(e, "ClearMemoryCommand", "ClearMemoryCommand");
+		exit(1);
+	}
+}
+
+//**********************************************************************************************************************
+
+int ClearMemoryCommand::execute(){
+	try {
+		
+		if (abort == true) { if (calledHelp) { return 0; }  return 2;	}
+		
+		ReferenceDB* rdb = ReferenceDB::getInstance();
+		rdb->clearMemory();
+		
+		return 0;
+	}
+	catch(exception& e) {
+		m->errorOut(e, "ClearMemoryCommand", "execute");
+		exit(1);
+	}
+}
+//**********************************************************************************************************************/