X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=clearcutcommand.h;h=942953f71bef907980d93355c5a1070599383f61;hb=2c97dd48b8e27ee0a6a86c7a082f4c504c3357c6;hp=af456566b241a5592b710c01d7d0486090c80705;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git

diff --git a/clearcutcommand.h b/clearcutcommand.h
index af45656..942953f 100644
--- a/clearcutcommand.h
+++ b/clearcutcommand.h
@@ -11,7 +11,6 @@
  */
 
 #include "command.hpp"
-#include "globaldata.hpp"
 
 /* 
   Evans, J., L. Sheneman, and J.A. Foster (2006) Relaxed Neighbor-Joining: 
@@ -32,6 +31,8 @@ public:
 	string getCommandName()			{ return "clearcut";			}
 	string getCommandCategory()		{ return "Hypothesis Testing";	}
 	string getHelpString();	
+	string getCitation() { return "Sheneman L, Evans J, Foster JA (2006). Clearcut: a fast implementation of relaxed neighbor joining. Bioinformatics 22: 2823-4. \nhttp://www.mothur.org/wiki/Clearcut"; }
+	string getDescription()		{ return "create a tree from a fasta or phylip file"; }
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }