X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyseqscommand.cpp;h=114036b2e89ea47a6a3aed1c9e08b514835ccd24;hb=4b54ce99af7db8019ea907cd7c2edf789369ada9;hp=6ec2d3886a218405f8132a03fe1c59e0b8c29c20;hpb=8159f34321e2c771638059b59a986caca9f3ab60;p=mothur.git

diff --git a/classifyseqscommand.cpp b/classifyseqscommand.cpp
index 6ec2d38..114036b 100644
--- a/classifyseqscommand.cpp
+++ b/classifyseqscommand.cpp
@@ -782,7 +782,7 @@ int ClassifySeqsCommand::execute(){
 			}
 #endif
 			
-			if (!m->isBlank(newaccnosFile)) { m->mothurOutEndLine(); m->mothurOut("[WARNING]: mothur suspects some of your sequences may be reversed, please check " + newaccnosFile + " for the list of the sequences."); m->mothurOutEndLine(); 
+			if (!m->isBlank(newaccnosFile)) { m->mothurOutEndLine(); m->mothurOut("[WARNING]: mothur reversed some your sequences for a better classification.  If you would like to take a closer look, please check " + newaccnosFile + " for the list of the sequences."); m->mothurOutEndLine(); 
                 outputNames.push_back(newaccnosFile); outputTypes["accnos"].push_back(newaccnosFile);
             }else { m->mothurRemove(newaccnosFile); }