X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyseqscommand.cpp;h=0504e6635802c3f6e3e186e4568675906774b3ff;hb=72e0be6b9c80009d4dbee24e8d690ad9514dc6fb;hp=664db6b3fdf7f991b851472405dc1493b0369147;hpb=43ed0accfbc2852849e104ff7eccdd2c42acd4ec;p=mothur.git

diff --git a/classifyseqscommand.cpp b/classifyseqscommand.cpp
index 664db6b..0504e66 100644
--- a/classifyseqscommand.cpp
+++ b/classifyseqscommand.cpp
@@ -457,10 +457,14 @@ ClassifySeqsCommand::ClassifySeqsCommand(string option)  {
 				search = "kmer";
 			}
 			
-			if (namefileNames.size() == 0){
-				vector<string> files; files.push_back(fastaFileNames[fastaFileNames.size()-1]); 
-				parser.getNameFile(files);
-			}
+            if (!abort) {
+                if (namefileNames.size() == 0){
+                    if (fastaFileNames.size() != 0) {
+                        vector<string> files; files.push_back(fastaFileNames[fastaFileNames.size()-1]); 
+                        parser.getNameFile(files);
+                    }
+                }
+            }
 			
 		}