X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyotucommand.cpp;h=aac16371f1251fc4c7b78639427f95896aa4c223;hb=2bb20fb79f19b8bda48492d89f8e8b7389431413;hp=94a60d4db9ff198423a401b74cbb7e78e9c010a5;hpb=8130ff9b30d872c578963f8d6f24af821b1ec33c;p=mothur.git diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp index 94a60d4..aac1637 100644 --- a/classifyotucommand.cpp +++ b/classifyotucommand.cpp @@ -114,7 +114,7 @@ ClassifyOtuCommand::ClassifyOtuCommand(string option) { void ClassifyOtuCommand::help(){ try { - m->mothurOut("The classify.otu command parameters are list, taxonomy, name, cutoff, and label. The taxonomy and list parameters are required.\n"); + m->mothurOut("The classify.otu command parameters are list, taxonomy, name, cutoff, label and probs. The taxonomy and list parameters are required.\n"); m->mothurOut("The name parameter allows you add a names file with your taxonomy file.\n"); m->mothurOut("The label parameter allows you to select what distance levels you would like a output files created for, and is separated by dashes.\n"); m->mothurOut("The default value for label is all labels in your inputfile.\n");