X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyotucommand.cpp;h=76d7504aa04b0170629b0f022a882be94ceacfc0;hb=a0f1fca79d2ddfa7ad36b4485039c68b5704fe8d;hp=170c234ac245e6c32e3174ad80145fbcc359f2f2;hpb=af0a94ea8f02421b2b73e77e68753a2b4c37768e;p=mothur.git

diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp
index 170c234..76d7504 100644
--- a/classifyotucommand.cpp
+++ b/classifyotucommand.cpp
@@ -616,9 +616,10 @@ int ClassifyOtuCommand::process(ListVector* processList) {
 			//add this bins taxonomy to summary
 			if (basis == "sequence") {
 				for(int j = 0; j < names.size(); j++) {  
-                    int numReps = 1;
-                    if (countfile != "") {  numReps = ct->getNumSeqs(names[j]); }
-                    for(int k = 0; k < numReps; k++) {  taxaSum->addSeqToTree(names[j], noConfidenceConTax);  }
+                    //int numReps = 1;
+                    //if (countfile != "") {  numReps = ct->getNumSeqs(names[j]); }
+                    //for(int k = 0; k < numReps; k++) {  taxaSum->addSeqToTree(names[j], noConfidenceConTax);  }
+                    taxaSum->addSeqToTree(names[j], noConfidenceConTax);
                 }
 			}else { //otu
                 map<string, bool> containsGroup;