X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyotucommand.cpp;h=3469c82c0c1507604e87ea05efc30ca74927e09f;hb=191ae1be0679d5cf4eda950b3b1bf26fb7dd503d;hp=cedc1f2c71c450f80ad5bcfefffe8713effab6fb;hpb=8bc3e5b38c2317a1715f53be22fa96455868c281;p=mothur.git

diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp
index cedc1f2..3469c82 100644
--- a/classifyotucommand.cpp
+++ b/classifyotucommand.cpp
@@ -25,6 +25,7 @@ vector<string> ClassifyOtuCommand::getValidParameters(){
 //**********************************************************************************************************************
 ClassifyOtuCommand::ClassifyOtuCommand(){	
 	try {
+		abort = true;
 		//initialize outputTypes
 		vector<string> tempOutNames;
 		outputTypes["constaxonomy"] = tempOutNames;