X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classifyotucommand.cpp;fp=classifyotucommand.cpp;h=e28961b74888ee5bdefb9eb022fd11afe328e07f;hb=0ca63a8165baa0afa459e644ebe140ba496d5ba0;hp=f36631a0590725867dffc402f74fd73af6168e20;hpb=1b0bddfbf4ac5df7e2dad03c8a5350e71b052f78;p=mothur.git diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp index f36631a..e28961b 100644 --- a/classifyotucommand.cpp +++ b/classifyotucommand.cpp @@ -206,7 +206,7 @@ ClassifyOtuCommand::ClassifyOtuCommand(string option) { if ((basis != "otu") && (basis != "sequence")) { m->mothurOut("Invalid option for basis. basis options are otu and sequence, using otu."); m->mothurOutEndLine(); } string temp = validParameter.validFile(parameters, "cutoff", false); if (temp == "not found") { temp = "51"; } - convert(temp, cutoff); + m->mothurConvert(temp, cutoff); temp = validParameter.validFile(parameters, "probs", false); if (temp == "not found"){ temp = "true"; } probs = m->isTrue(temp);