X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=classify.cpp;h=7f451261550a949b3a1cbb7ab72fd374122597bb;hb=62568a297aaf939ab753334f17abde82ec8e8531;hp=e07344d4678a0ca263008e4b10d4d125ad8ef122;hpb=b8f3e71c8a0310e25261464d27e6fcfe891483b0;p=mothur.git

diff --git a/classify.cpp b/classify.cpp
index e07344d..7f45126 100644
--- a/classify.cpp
+++ b/classify.cpp
@@ -128,7 +128,7 @@ void Classify::generateDatabaseAndNames(string tfile, string tempFile, string me
 				gobble(fastaFile);
 			
 				names.push_back(temp.getName());
-								
+							
 				database->addSequence(temp);	
 			}
 			fastaFile.close();
@@ -153,6 +153,11 @@ void Classify::generateDatabaseAndNames(string tfile, string tempFile, string me
 #endif		
 		database->setNumSeqs(names.size());
 		
+		//sanity check
+		bool okay = phyloTree->ErrorCheck(names);
+		
+		if (!okay) { m->control_pressed = true; }
+		
 		m->mothurOut("DONE."); m->mothurOutEndLine();
 		m->mothurOut("It took " + toString(time(NULL) - start) + " seconds generate search database. "); m->mothurOutEndLine();