X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chopseqscommand.h;h=cc22c751483a75f246f69e4955985f158d041638;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=31b495b20a7305d2552a770b67f9f2f812a90b1a;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git diff --git a/chopseqscommand.h b/chopseqscommand.h index 31b495b..cc22c75 100644 --- a/chopseqscommand.h +++ b/chopseqscommand.h @@ -25,9 +25,11 @@ class ChopSeqsCommand : public Command { vector setParameters(); string getCommandName() { return "chop.seqs"; } string getCommandCategory() { return "Sequence Processing"; } - string getHelpString(); + string getOutputFileNameTag(string, string); + string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Chops.seqs"; } - + string getDescription() { return "trim sequence length"; } + int execute(); void help() { m->mothurOut(getHelpString()); }