X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimerauchimecommand.h;h=5423a171d5698bda82c5869401e3509e1f059439;hb=49d2b7459c5027557564b21e9487dadafbbbdc96;hp=dfb410f1acf31390df8c511b87e5a0f9dce74283;hpb=791f42d21a85f794529fd4c912dcc27d873c25e8;p=mothur.git diff --git a/chimerauchimecommand.h b/chimerauchimecommand.h index dfb410f..5423a17 100644 --- a/chimerauchimecommand.h +++ b/chimerauchimecommand.h @@ -26,6 +26,7 @@ public: vector setParameters(); string getCommandName() { return "chimera.uchime"; } string getCommandCategory() { return "Sequence Processing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "uchime by Robert C. Edgar\nhttp://drive5.com/uchime\nThis code is donated to the public domain.\nhttp://www.mothur.org/wiki/Chimera.uchime\nEdgar,R.C., Haas,B.J., Clemente,J.C., Quince,C. and Knight,R. (2011), UCHIME improves sensitivity and speed of chimera detection, Bioinformatics, in press.\n"; } string getDescription() { return "detect chimeric sequences"; }