X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimerauchimecommand.cpp;h=ce7ce456d87c5c8c6e5a137cd661b02710e0977c;hb=3504e4e2feeb05aabb0c79aa42cb696522030924;hp=04e1f1ddf244057e462d51c39c2913900d6424c3;hpb=deba0af0ccdcb6005ed5b2b82649b137c63fbdf7;p=mothur.git

diff --git a/chimerauchimecommand.cpp b/chimerauchimecommand.cpp
index 04e1f1d..ce7ce45 100644
--- a/chimerauchimecommand.cpp
+++ b/chimerauchimecommand.cpp
@@ -556,11 +556,11 @@ ChimeraUchimeCommand::ChimeraUchimeCommand(string option)  {
 			temp = validParameter.validFile(parameters, "skipgaps2", false);				if (temp == "not found") { temp = "t"; }
 			skipgaps2 = m->isTrue(temp); 
             
-            string usedDups = "false";
+            
 			temp = validParameter.validFile(parameters, "dereplicate", false);	
 			if (temp == "not found") { 
 				if (groupfile != "")    {  temp = "false";					}
-				else                    {  temp = "true"; usedDups = "";	}
+				else                    {  temp = "true"; 	}
 			}
 			dups = m->isTrue(temp);