X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimerauchimecommand.cpp;h=abd699eff98156435de11ad2f3cf891b09ffa76e;hb=a150db3c2bfd7b76420048a1e94ebe397f2c6045;hp=58e678198acc83e980942317984361b46f6194e0;hpb=81a56b9cea37749c5d4a7646a8d6148a4703bfc3;p=mothur.git

diff --git a/chimerauchimecommand.cpp b/chimerauchimecommand.cpp
index 58e6781..abd699e 100644
--- a/chimerauchimecommand.cpp
+++ b/chimerauchimecommand.cpp
@@ -605,6 +605,9 @@ int ChimeraUchimeCommand::createProcesses(string outputFileName, string filename
 			remove((accnos + toString(processIDS[i]) + ".temp").c_str());
 		}
 #endif		
+		//get rid of the file pieces.
+		for (int i = 0; i < files.size(); i++) { remove(files[i].c_str()); }
+		
 		return num;	
 	}
 	catch(exception& e) {