X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeraslayercommand.h;h=a2e22ae527d465b475a4f89b5fa606198315c3a4;hb=5a4ac4f954c4b4445bcee272f1f8220ddcc9c1e4;hp=6f3455debc4b6f161102a7bd2a75e797d3c639f0;hpb=88fbc534a92cb91900e98a3288dfa1f68828b69b;p=mothur.git

diff --git a/chimeraslayercommand.h b/chimeraslayercommand.h
index 6f3455d..a2e22ae 100644
--- a/chimeraslayercommand.h
+++ b/chimeraslayercommand.h
@@ -27,6 +27,7 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "chimera.slayer";		}
 	string getCommandCategory()		{ return "Sequence Processing"; }
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
 	string getCitation() { return "Haas BJ, Gevers D, Earl A, Feldgarden M, Ward DV, Giannokous G, Ciulla D, Tabbaa D, Highlander SK, Sodergren E, Methe B, Desantis TZ, Petrosino JF, Knight R, Birren BW (2011). Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res. \nhttp://www.mothur.org/wiki/Chimera.slayer"; }
 	string getDescription()		{ return "detect chimeric sequences"; }
@@ -172,7 +173,7 @@ struct slayerData {
 };
 
 /**************************************************************************************************/
-#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux) || (__linux__) || (__unix__) || (__unix)
 #else
 static DWORD WINAPI MySlayerThreadFunction(LPVOID lpParam){ 
 	slayerData* pDataArray;