X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeraslayercommand.h;h=a2e22ae527d465b475a4f89b5fa606198315c3a4;hb=28bcfc4a41b8b82f66636587e0d4d355d07cbdd1;hp=2c6fec8d8d1082ea270f5e2c2a8832a7b57033a4;hpb=43ed0accfbc2852849e104ff7eccdd2c42acd4ec;p=mothur.git diff --git a/chimeraslayercommand.h b/chimeraslayercommand.h index 2c6fec8..a2e22ae 100644 --- a/chimeraslayercommand.h +++ b/chimeraslayercommand.h @@ -27,6 +27,7 @@ public: vector setParameters(); string getCommandName() { return "chimera.slayer"; } string getCommandCategory() { return "Sequence Processing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "Haas BJ, Gevers D, Earl A, Feldgarden M, Ward DV, Giannokous G, Ciulla D, Tabbaa D, Highlander SK, Sodergren E, Methe B, Desantis TZ, Petrosino JF, Knight R, Birren BW (2011). Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res. \nhttp://www.mothur.org/wiki/Chimera.slayer"; } string getDescription() { return "detect chimeric sequences"; }