X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeraslayercommand.cpp;h=7dfebb06b8ff229639ced1b7fb1aec472cd9a689;hb=2405cc589aaaf0c44809a48fe98d3b96863dac0b;hp=97edf1130be292c1495811a4a9c52acc77cde04b;hpb=ea67d144345462d2a0ed8633c0b14f6cec8cb36e;p=mothur.git diff --git a/chimeraslayercommand.cpp b/chimeraslayercommand.cpp index 97edf11..7dfebb0 100644 --- a/chimeraslayercommand.cpp +++ b/chimeraslayercommand.cpp @@ -25,7 +25,7 @@ vector ChimeraSlayerCommand::setParameters(){ CommandParameter pmincov("mincov", "Number", "", "70", "", "", "",false,false); parameters.push_back(pmincov); CommandParameter pminsnp("minsnp", "Number", "", "10", "", "", "",false,false); parameters.push_back(pminsnp); CommandParameter pminbs("minbs", "Number", "", "90", "", "", "",false,false); parameters.push_back(pminbs); - CommandParameter psearch("search", "Multiple", "kmer-blast-distance", "distance", "", "", "",false,false); parameters.push_back(psearch); + CommandParameter psearch("search", "Multiple", "kmer-blast-distance", "blast", "", "", "",false,false); parameters.push_back(psearch); CommandParameter pprocessors("processors", "Number", "", "1", "", "", "",false,false); parameters.push_back(pprocessors); CommandParameter prealign("realign", "Boolean", "", "T", "", "", "",false,false); parameters.push_back(prealign); CommandParameter ptrim("trim", "Boolean", "", "F", "", "", "",false,false); parameters.push_back(ptrim);