X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeraperseuscommand.h;h=01f5768a0c070c70aa6c7264b6d482b3636d7148;hb=0c64d4590ecba2cb19475ca0af206d85bfb2195c;hp=84563ac6ecc006ca7150f7f5e025b340da964fdf;hpb=74dc92cf53df65fd8b14d8eaf35489bbecbccac6;p=mothur.git

diff --git a/chimeraperseuscommand.h b/chimeraperseuscommand.h
index 84563ac..01f5768 100644
--- a/chimeraperseuscommand.h
+++ b/chimeraperseuscommand.h
@@ -44,7 +44,7 @@ private:
 	
 	bool abort;
 	string fastafile, groupfile, outputDir, namefile;
-	int processors;
+	int processors, alignLength;
 	double cutoff, alpha, beta;
 	
 	vector<string> outputNames;
@@ -98,7 +98,7 @@ struct perseusData {
 	}
 };
 /**************************************************************************************************/
-#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux) || (__linux__) || (__unix__) || (__unix)
 #else
 static DWORD WINAPI MyPerseusThreadFunction(LPVOID lpParam){ 
 	perseusData* pDataArray;