X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeracheckrdp.cpp;fp=chimeracheckrdp.cpp;h=790d3ebe01100c1d615be9d189e73d6fa03f28ef;hb=aa9238c0a9e6e7aa0ed8b8b606b08ad4fd7dcfe3;hp=3e6dacdee85dbb75fb9b6535f259eead8a4f2509;hpb=182db2b6f1747bc1e0b8cd3eceec8751abdd31d5;p=mothur.git

diff --git a/chimeracheckrdp.cpp b/chimeracheckrdp.cpp
index 3e6dacd..790d3eb 100644
--- a/chimeracheckrdp.cpp
+++ b/chimeracheckrdp.cpp
@@ -24,7 +24,7 @@ ChimeraCheckRDP::~ChimeraCheckRDP() {
 	}
 }	
 //***************************************************************************************************************
-void ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
+int ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
 	try {
 		
 		m->mothurOut("Processing: " + querySeq->getName()); m->mothurOutEndLine();
@@ -48,6 +48,8 @@ void ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
 				makeSVGpic(IS);  //zeros out negative results
 			}
 		}
+		
+		return 0;
 	}
 	catch(exception& e) {
 		m->errorOut(e, "ChimeraCheckRDP", "print");
@@ -55,7 +57,7 @@ void ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
 	}
 }
 //***************************************************************************************************************
-void ChimeraCheckRDP::doPrep() {
+int ChimeraCheckRDP::doPrep() {
 	try {
 		templateDB = new AlignmentDB(templateFileName, "kmer", kmerSize, 0.0,0.0,0.0,0.0);
 		m->mothurOutEndLine();
@@ -65,6 +67,8 @@ void ChimeraCheckRDP::doPrep() {
 		if (name != "") { 
 			readName(name);  //fills name map with names of seqs the user wants to have .svg for.  
 		}
+		
+		return 0;
 	}
 	catch(exception& e) {
 		m->errorOut(e, "ChimeraCheckRDP", "doPrep");