X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeracheckrdp.cpp;fp=chimeracheckrdp.cpp;h=04c143fecc50207a682f033567372959bcb831be;hb=315e38cf393c82be238da5b32574f225a020d25c;hp=12785137232677e3a056a43fd31b705f9b618734;hpb=c99f3846e7a7b6f06ab46508baa5409204ad6290;p=mothur.git

diff --git a/chimeracheckrdp.cpp b/chimeracheckrdp.cpp
index 1278513..04c143f 100644
--- a/chimeracheckrdp.cpp
+++ b/chimeracheckrdp.cpp
@@ -10,7 +10,7 @@
 #include "chimeracheckrdp.h"
 		
 //***************************************************************************************************************
-ChimeraCheckRDP::ChimeraCheckRDP(string filename, string temp) {  fastafile = filename;  templateFile = temp;  }
+ChimeraCheckRDP::ChimeraCheckRDP(string filename, string temp, string o) {  fastafile = filename;  templateFile = temp; outputDir = o;  }
 //***************************************************************************************************************
 
 ChimeraCheckRDP::~ChimeraCheckRDP() {
@@ -338,7 +338,7 @@ void ChimeraCheckRDP::getCutoff() {
 void ChimeraCheckRDP::makeSVGpic(vector<sim> info, int query) {
 	try{
 		
-		string file = querySeqs[query]->getName() + ".chimeracheck.svg";
+		string file = outputDir + querySeqs[query]->getName() + ".chimeracheck.svg";
 		ofstream outsvg;
 		openOutputFile(file, outsvg);