X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=chimeracheckcommand.cpp;fp=chimeracheckcommand.cpp;h=6a4732cf72cd4222e539beb93c6b0b45226d2a08;hb=ce8794490ab1d83adcdb2b92e0302a1e43e17adf;hp=87f51e7c95c136403024c593e681a844ca18d006;hpb=1f3d51cfdbe3e28c780501b7ed82d64fe27dba98;p=mothur.git

diff --git a/chimeracheckcommand.cpp b/chimeracheckcommand.cpp
index 87f51e7..6a4732c 100644
--- a/chimeracheckcommand.cpp
+++ b/chimeracheckcommand.cpp
@@ -551,6 +551,7 @@ int ChimeraCheckCommand::driver(linePair* filePos, string outputFName, string fi
 			
 			//report progress
 			if((count) % 100 == 0){	m->mothurOut("Processing sequence: " + toString(count)); m->mothurOutEndLine();		}
+            count++;
 		}
 		//report progress
 		if((count) % 100 != 0){	m->mothurOut("Processing sequence: " + toString(count)); m->mothurOutEndLine();		}