X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=catchallcommand.h;h=d1b8a2a8dfabf300d4d6cb7591e043e2ea48b113;hb=f509429e06e545bde69c97cacc0eb436775bd329;hp=c9fe28590e5d5b2082f1d7f1bf04daf4316090ef;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/catchallcommand.h b/catchallcommand.h
index c9fe285..d1b8a2a 100644
--- a/catchallcommand.h
+++ b/catchallcommand.h
@@ -31,9 +31,11 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "catchall";			}
 	string getCommandCategory()		{ return "OTU-Based Approaches";	}
+	string getOutputFileNameTag(string, string);
 	string getHelpString();	
-	string getCitation() { return "http://www.northeastern.edu/catchall/index.html http://www.mothur.org/wiki/Catchall"; }
-
+	string getCitation() { return "Bunge, J. (2011). Estimating the number of species with CatchAll. Forthcoming in Proceedings of the Pacific Symposium on Biocomputing 2011.\nhttp://www.northeastern.edu/catchall/index.html http://www.mothur.org/wiki/Catchall"; }
+	string getDescription()		{ return "estimate number of species"; }
+	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }