X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=catchallcommand.cpp;h=69b9f04becdbb492fc69209837be5a0581123b99;hb=0e40e23448c2ee274268d85e0d0e65cb9eaeee6f;hp=8e29d6294c942369b178eea7b3cf6a0c3e7ba272;hpb=5e5253ff472de3c6349e562d2580873287be0c65;p=mothur.git

diff --git a/catchallcommand.cpp b/catchallcommand.cpp
index 8e29d62..69b9f04 100644
--- a/catchallcommand.cpp
+++ b/catchallcommand.cpp
@@ -121,6 +121,11 @@ CatchAllCommand::CatchAllCommand(string option)  {
 			if (sharedfile == "not open") { sharedfile = ""; abort = true; }
 			else if (sharedfile == "not found") { sharedfile = "";   }
 			
+			//check for shared file loaded during read.otu
+			if (sharedfile == "") {
+				if (globaldata->getSharedFile() != "") { sharedfile = globaldata->getSharedFile(); }
+			}
+			
 			string label = validParameter.validFile(parameters, "label", false);			
 			if (label == "not found") { label = ""; }
 			else {