X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=branch%2Fpatch%2Fexec%2Fupdate_cache;fp=branch%2Fpatch%2Fexec%2Fupdate_cache;h=0000000000000000000000000000000000000000;hb=21489018a9c733dc99bb8899ef53088166d0f189;hp=689384670f01d01b9ce20ae4e1909bc1ca0194c2;hpb=49b44dc25b2664f0b2cbbed14a444d77c4d0ca07;p=cran2deb.git diff --git a/branch/patch/exec/update_cache b/branch/patch/exec/update_cache deleted file mode 100755 index 6893846..0000000 --- a/branch/patch/exec/update_cache +++ /dev/null @@ -1,33 +0,0 @@ -#!/usr/bin/env Rscript -library(cran2deb) -library(ctv) - -argv <- commandArgs() -argv <- argv[-(1:match("--args", argv))] - -#mirror <- 'http://cran.uk.r-project.org/' -mirror <- 'http://cran.r-project.org/' - -message('updating list of available R packages...') -available <- available.packages(contrib.url(mirror)) - -#available <- rbind(available,available.packages(contrib.url('http://www.bioconductor.org/'))) -#dupes <- duplicated(rownames(available), fromLast=T) -#available <- available[!dupes,] - -message('updating list of available R task views...') -ctv.available <- available.views(repo=mirror) - -message('updating list of base R packages...') -base_pkgs <- readLines(pipe(paste('sudo pbuilder --execute --override-config --configfile' - ,shQuote(pbuilder_config),'-- /usr/bin/R --vanilla 2>&1 >/dev/null <' - ,shQuote(file.path(root,'exec/get_base_pkgs')) - ,'| grep -v ^W:'))) - -message('updating list of existing Debian packages...') -debian_pkgs <- readLines(pipe('apt-cache rdepends r-base-core | sed -e "/^ r-cran/{s/^[[:space:]]*r/r/;p}" -e d | sort -u')) - -save(debian_pkgs, base_pkgs, available, ctv.available, file=file.path(cache_root,'cache.rda'),eval.promises=T) - -message('synchronising database...') -db_update_package_versions()