X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_test%2Ftest%2Ftest_write_fasta;h=4307e2590cd68261d3c82b0919420bb23fae9b67;hb=9052a73697c99a1f0634e2d1f2cf2932f8288810;hp=a2f5b0769e6e7d921291c4cdf70582fee397c883;hpb=e5bb66fb9c53778a903a3bc6b8f6a206acb538e2;p=biopieces.git diff --git a/bp_test/test/test_write_fasta b/bp_test/test/test_write_fasta index a2f5b07..4307e25 100755 --- a/bp_test/test/test_write_fasta +++ b/bp_test/test/test_write_fasta @@ -2,10 +2,20 @@ source "$BP_DIR/bp_test/lib/test.sh" -run "write_fasta -I $in -o $tmp.1 -x" -assert_no_diff $tmp.1 $out.1 -rm $tmp.1 +run "$bp -I $in -o $tmp -x" +assert_no_diff $tmp $out.1 +clean -run "write_fasta -I $in -w 4 -o $tmp.2 -x" -assert_no_diff $tmp.2 $out.2 -rm $tmp.2 +run "$bp -I $in -w 4 -o $tmp -x" +assert_no_diff $tmp $out.2 +clean + +run "$bp -I $in -w 4 -Z gzip -o $tmp.gz -x" +gunzip $tmp.gz +assert_no_diff $tmp $out.3 +clean + +run "$bp -I $in -w 4 -Z bzip2 -o $tmp.bz2 -x" +bunzip2 $tmp.bz2 +assert_no_diff $tmp $out.3 +clean