X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_test%2Fin%2Forder_pairs.in;h=f9a2a66b6fb8dcd793074ed44debd2ff927d1e6b;hb=849409088c8d611089191593ec8ee3bb2a95db45;hp=3e30de4db9fc2302797a745f25f1e9d10755b8f8;hpb=a5acc95f3372bece8dbcfe676941f46c94293c0e;p=biopieces.git

diff --git a/bp_test/in/order_pairs.in b/bp_test/in/order_pairs.in
index 3e30de4..f9a2a66 100644
--- a/bp_test/in/order_pairs.in
+++ b/bp_test/in/order_pairs.in
@@ -38,3 +38,103 @@ SEQ: AANAANANCTNCNNANCGNCGGTTTCGTNANNANNGGTTCGCANCGNNNC
 SEQ_LEN: 50
 SEQ_NAME: ILLUMINA-52179E_0004:2:1:1045:16499#TTAGGC/2
 ---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:1958:2175 2:N:0:TAGCTG
+SEQ: CTACCTGTGCAAAAAGCACCAAGCAGAGCCATGCTNAACATGGACAGGCGAGCTGGTGTCATAAACATTTCCTGNTTTTANTCTATNGTAGNTANTAA
+SEQ_LEN: 98
+SCORES: bbbeeeecggfeghfggfhihhieh]ffbeghiiiBOYcfghighfghghaedfeeV^abcccce`bdbdc```BKZ^aaBKW^^aBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2412:2210 2:N:0:TAGCTG
+SEQ: CCGGGCTTGATGCCCTGGCATTGGAGCAATACGAGTTGTTGCTGGAAGAACAAGCCTATCCGTTTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
+SEQ_LEN: 98
+SCORES: ^^_eee^ccgeggiidfdd_ggfhhhfhifhhfgfggffgdeghe_ebfgedfXZcffdggdT`^aeeee^`bcacc\^Z^a[]Q[`b^]^aaBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2110:2236 2:N:0:TAGCTG
+SEQ: CCATCACGCAATCTGCTAACACCGACAGATAACGCTCGCGCCAACGCAGATCTGTATTGCGGGCATCCTGCATATTACTGTTAGGAATAGATCGGAAG
+SEQ_LEN: 98
+SCORES: ZZac^cd`gf`eeifhh`dfbaafagha`g`_`e`a^cZ`edS\deedcc`^_]]bccRTZQW[T^bbb__bbbb__bc]bc_R^bc]_]bbba[[^R
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2326:2150 1:N:0:TAGCTG
+SEQ: CATAGGCTTTTTTAACGGCCCAGCCAAAGGCGATCAGGCCAAATAGNANTACCCACCAGTACTGTTGCATNGTCTCAGAAATGNNCAATACAAATTGG
+SEQ_LEN: 98
+SCORES: _[_cccccgcaeeaeJb`b^dd_cg]cZedbfU_eghhhddfg[f]BLBLTZ^abbb^aT]b_`]`b`Y`BKT^^ac_YYY_`BBJGQW_b]bbbbbb
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:1832:2218 1:N:0:TAGCTG
+SEQ: GCTTTGACATAGTCGCTCCAGAATTGCCAGCTAGGGTTAGCTTGGCAACTGCAGCGACGTAATGTGCTGTGGCAGATCAATTTATCTGTTTTGAATCA
+SEQ_LEN: 98
+SCORES: ^P^PJ\Y`eea`e[daYdecggadgdXJIYVbdc`efg_cdedI^aXIO^abeb\eL_daQU^_V]``]UGTZ\^BBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2155:2169 2:N:0:TAGCTG
+SEQ: AACAAACTGTTTTGCAGAATGTTATGAATGGTCCGNGCGCNTNAACCCAGATCGGAAGAGCGTCGTGTAGGGAANGANGGNNGNNCNCGGNNNNNGNC
+SEQ_LEN: 98
+SCORES: a__eeecegcgegihhifhhfcgdghfffiibgheBPPYcBOBOXaffffgfhhhffa`bfe\^cR]Z]`baZ`BBBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2037:2173 1:N:0:TAGCTG
+SEQ: CTGGGTGCCACTGTCGCCACCCTGTTAAGTCGTGAACCCGTTACCATCAGCACTGATGCCAACGTCTGGCAGGCCGCCCAGCTAATGACCGAGCAAAA
+SEQ_LEN: 98
+SCORES: _[_cccceeegggffhiiihdfdefhhafeff_efdfgfhifhghhfbgbgdggfdhihhegggeeeebdZ^aaa^_aaX``b]b_bcccXXaV_ccb
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2284:2226 1:N:0:TAGCTG
+SEQ: CGCCTTTTCATCAGCAACAGACAGTTACGACGCATATCGCCACCCAAATGTTTGCCGAGGCTAAACGGGTATTGAAACGCGGTGGCCGCTTGCGTATT
+SEQ_LEN: 98
+SCORES: ___eeeeegagffgghdefb_e_eggia`\egfdhhdf`gdfghihiiib_`gghf``cbcabcbc^^_KW`c]Y_bbcc[a[[_^aa]cccc]__ab
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2412:2210 1:N:0:TAGCTG
+SEQ: AAACGGATAGGCTTGTTCTTCCAGCAACAACTCGTATTGCTCCAATGCCAGGGCATCAAGCCCGGAGATCGGAAGAGCACACGTCTGAACTCCAGTCA
+SEQ_LEN: 98
+SCORES: _bbaceceggeccgeZddghaegffiiWdghfff``ffgfacfcffhiihhfi\_e\egfcggde]acdccc^aa_`[`aca_a^b_`bbbbbbbS_b
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2284:2226 2:N:0:TAGCTG
+SEQ: GGCCAAATAACCGCTGCAGTTGCTGCTGATAATTCAGGTGACGGTTAGCCACAATACGCAAGCGGCCACCGCGTTTCAATACCCGTTTAGCCTCGGCA
+SEQ_LEN: 98
+SCORES: bbbeeeeegfgggiehihhef_gfgfhfghdffhihhfXc^egc_cgabgffghhfhfhfg`d^cba_ac^\_W]abcb_bccc]X`bQ]`b`^_a__
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2037:2173 2:N:0:TAGCTG
+SEQ: AGCCTGGCCCGGATATCCTTGTCAGTGATAATGCCNGTCAGATGCTGCTTGGCATCTAAAATAAGCAAGGATGANACCTTNTGNTCNGTCNNTANCTG
+SEQ_LEN: 98
+SCORES: b__eeeeeggggcgghiiiihefggcgeffagdbfBOY^cffhfgbgfhdggXegghagghfffeggggeXV^_BKZ\_cBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:1958:2175 1:N:0:TAGCTG
+SEQ: TACCTAAAATAATTAATATCTACAATAGAATAAAATCAGGAAATGTTTATGACACCAGCTCGCCTGTCCATGTTCAGCATGGCTCTGCTTGGTGCTTT
+SEQ_LEN: 98
+SCORES: __acceeegcgggiihihifiiiiiiiiiiefihhhhchhdhiafcghidffghhiihidfggighedhdhibdggegdgeeeedddcddccbcccab
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2155:2169 1:N:0:TAGCTG
+SEQ: GGGTTCAGGCGCCCGGACCATTCATAACATTCTGCAAAACAGTTTGTTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTGATCTCGTATG
+SEQ_LEN: 98
+SCORES: ___J`cccgZccggghhhhffhbghhfeegffdghhfchhhfaffgbb]e`_c\a_\degdddbbb``^aY]bbb_bbbbbbb`bbbb_]`R]^[WR[
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2326:2175 1:N:0:TAGCTG
+SEQ: GTGCCAAAGAGGTACTGATGCTTTGTTGTTGTGGTTTAGCCGCACATTCAGCCTCGCTGACGGCAGCTAACTGCACATCTTTGGGGATATCCACCAGA
+SEQ_LEN: 98
+SCORES: ^PWYP`R^cRcccgdghS`d_ebc[`ebffddb[ffffagf[O^_Uc`SabeffeegffW\\[XXR^bTGT__]b]_Y_]Zbbba][abb_cbba_aa
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2326:2175 2:N:0:TAGCTG
+SEQ: GGTGGATATCCCCAAAGATGTGCAGTTAGCTGCCGNCAGCGAGGCTGAATGTGCGGCTAAACCACAACAACAAANCATCANTACCTNTTTGNCANAGA
+SEQ_LEN: 98
+SCORES: ___cc\c`eggcghad`acabgfdg`g^daagaefBPYOafY_fYaa]e\aMWW__[W^Z_RZ^`aa__`Q[`^BBBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2139:2216 2:N:0:TAGCTG
+SEQ: ATGTGTCGATGCTGGATAACGAATGGGGTATGTCGGTGTATCCGCTGGGGGCTGGTCATGAAGGGGTGGGGCATATTGCAGCTGTGGGTTCGGGGGCC
+SEQ_LEN: 98
+SCORES: JJ\caa`^Ye`gW^[J[Q[`YJJ`dfa^PYbfX^^_H^^eh]fb`aefGZ_BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2139:2216 1:N:0:TAGCTG
+SEQ: CCACCTGCCCGGTTTTAAGATGACTGACCGCCGAACCCACAGCTGCAATATGCCCCACCACTTCATGACCAGCCACCAGCGGATACGCCGACATACCC
+SEQ_LEN: 98
+SCORES: _Z_cccccaY_^cghhbagg[e]de][^ZcghfY_efgfbfdQ^^\bdZaaRMZZT\FRT\LLYYZTGT]_[^a^[^aBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2110:2236 1:N:0:TAGCTG
+SEQ: ATTCCTAACAGTAATATGCAGGATGCCCGCAATACAGATCTGCGTTGGCGCGAGCGTTATCTGTCGGTGTTAGCAGATTTCGTGATGGAGATCGGAAG
+SEQ_LEN: 98
+SCORES: ___cc`Sc^J[ecK``f]cY^RPbcRYJQQY^YccacfehhheU^^^eXFS_BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:2326:2150 2:N:0:TAGCTG
+SEQ: CGGCCNNNACCCAATTTGNNTTGGGCATTTCTGANNNNNNNCNACNNTACTGNNGGGTANTGCTNNNTGNNNNGNNNNNNNNNNNNNNNNNNNNNNNN
+SEQ_LEN: 98
+SCORES: WZ^ceBBBQQQQbffgggBBSQ`_fRZdegffdhBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
+---
+SEQ_NAME: HWI-ST575:107:C0HE6ACXX:5:1101:1832:2218 2:N:0:TAGCTG
+SEQ: GGTTATCGATCTGGAAAAAGCAACTAAACCTAAAGCTAAACCACGTAGCGCCGGGTAAATGATTCAAAACAGATAAATTGATCTGCCACAGCACATTA
+SEQ_LEN: 98
+SCORES: ^VYPJQ`c^JJ[b[efg^dHJ`aa`adXd_ZXXbIIIY[af_H^aWHWPZ[`gggFFZ^bd_Z]Zb_]ba\^ZGY_`TZ``cc[bbR]]^aaXQ[bbb
+---