X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_conf%2Fbashrc;h=ac5ace41d921a049878be187f38a775f27d383da;hb=4148425e5c7f540c34a2be6cfe19bb89d16a54cb;hp=0a113aee592c30a3c4b1a7f8502d2a09e4f9dadc;hpb=a243213e6e37774b4363374706405070527e9826;p=biopieces.git diff --git a/bp_conf/bashrc b/bp_conf/bashrc index 0a113ae..ac5ace4 100644 --- a/bp_conf/bashrc +++ b/bp_conf/bashrc @@ -1,5 +1,7 @@ ### >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< +### DO NOT MAKE ANY CHANGES + ### Stuff that enables Biopieces. ### BP_DIR, BP_DATA, BP_TMP, and BP_LOG should all be set in ~/.bashrc @@ -16,6 +18,10 @@ export BP_C="$BP_DIR/code_c" # Direcotory with C code. export BP_PYTHON="$BP_DIR/code_python" # Direcotory with Pyton code. export BP_RUBY="$BP_DIR/code_ruby" # Direcotory with Ruby code. +### This is the directory with the document root fro the Biopieces Genome Browser: + +export BP_WWW="$BP_DIR/www" # Direcotory with Biopieces Genome Browser. + ### Here we add the biopiece variable to the existing PATH. export PATH="$PATH:$BP_BIN" @@ -26,7 +32,12 @@ export PERL5LIB="$PERL5LIB:$BP_PERL" ### Here we add the Biopieces Ruby libraries to RUBYLIB. -export RUBYLIB="$RUBYLIB:$BP_RUBY" +export RUBYLIB="$RUBYLIB:$BP_RUBY/lib" + +### Some useful aliases. + +alias bp_update="svn update $BP_DIR && svn update $BP_DIR/bp_usage" +alias bp_test="$BP_DIR/bp_test/test_all" ### >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<