X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Ftransliterate_seq;h=14dcb299f9ee0aecbd71af38fab9781119138941;hb=48bea5c28b89dc5586d0bddb338ccd6ba23aa1f9;hp=a53c62ad95d9cfbb57bfd314857575cf96d2befd;hpb=5aed4676ad1bf35abbade6215ac90ee591e6d8fe;p=biopieces.git

diff --git a/bp_bin/transliterate_seq b/bp_bin/transliterate_seq
index a53c62a..14dcb29 100755
--- a/bp_bin/transliterate_seq
+++ b/bp_bin/transliterate_seq
@@ -26,6 +26,7 @@
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
 
+use warnings;
 use strict;
 use Maasha::Biopieces;
 
@@ -58,6 +59,8 @@ while ( $record = Maasha::Biopieces::get_record( $in ) )
             eval "\$record->{ 'SEQ' } =~ tr/$search/$replace/";
         } elsif ( $delete ) {
             eval "\$record->{ 'SEQ' } =~ tr/$delete//d";
+
+            $record->{ "SEQ_LEN" } = length $record->{ "SEQ" };
         }
     }