X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Freverse_seq;h=9b08e222893760aa5f583fcd7a1ebd36b7b2b3bc;hb=2f0fd91b461033529a4a72e161bd133252a22eb6;hp=7d137272a4f7aa0b20e238078920628565d03e4f;hpb=5aed4676ad1bf35abbade6215ac90ee591e6d8fe;p=biopieces.git diff --git a/bp_bin/reverse_seq b/bp_bin/reverse_seq index 7d13727..9b08e22 100755 --- a/bp_bin/reverse_seq +++ b/bp_bin/reverse_seq @@ -26,6 +26,7 @@ # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< +use warnings; use strict; use Maasha::Biopieces; @@ -42,7 +43,8 @@ $out = Maasha::Biopieces::write_stream( $options->{ "stream_out" } ); while ( $record = Maasha::Biopieces::get_record( $in ) ) { - $record->{ "SEQ" } = reverse $record->{ "SEQ" } if $record->{ "SEQ" }; + $record->{ "SEQ" } = reverse $record->{ "SEQ" } if $record->{ "SEQ" }; + $record->{ "SCORES" } = reverse $record->{ "SCORES" } if $record->{ "SCORES" }; Maasha::Biopieces::put_record( $record, $out ); }