X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fread_embl;h=ca2839bb8e22b52f6dd2370c147b7289ce0e1d71;hb=2f0fd91b461033529a4a72e161bd133252a22eb6;hp=91f6728070a3acb1d4a027144edd9ce497d3c12f;hpb=6e1dc9d8fdbd5e03b6f935833fc2d00e91a41c95;p=biopieces.git diff --git a/bp_bin/read_embl b/bp_bin/read_embl index 91f6728..ca2839b 100755 --- a/bp_bin/read_embl +++ b/bp_bin/read_embl @@ -52,15 +52,15 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output| num = 0 last = false - if options.has_key? :data_in + if options[:data_in] options[:data_in].each do |file| - EMBL.open(file, mode='r') do |embl_io| + EMBL.open(file, 'r') do |embl_io| embl_io.each(hash_keys, hash_feats, hash_quals) do |entry| output.puts entry num += 1 - if options.has_key? :num and options[:num] == num + if options[:num] and options[:num] == num last = true break end