X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fplot_seqlogo;h=3495c9e5ae54279d0a396ee07bd0f767b0585daf;hb=172f31c83a6de7f5af893cae7fe5d39714d50ff7;hp=e9be5a6b2fae5df2b959f8691d6853b772acd9a8;hpb=b607bb9d6e4adcebd9f9e128aacc91a212010ee0;p=biopieces.git diff --git a/bp_bin/plot_seqlogo b/bp_bin/plot_seqlogo index e9be5a6..3495c9e 100755 --- a/bp_bin/plot_seqlogo +++ b/bp_bin/plot_seqlogo @@ -1,4 +1,4 @@ -#!/usr/bin/env perl -w +#!/usr/bin/env perl # Copyright (C) 2007-2009 Martin A. Hansen. @@ -26,6 +26,7 @@ # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< +use warnings; use strict; use Maasha::Biopieces; use Maasha::Plot; @@ -63,26 +64,22 @@ print $fh $logo; close $fh; +Maasha::Biopieces::close_stream( $in ); +Maasha::Biopieces::close_stream( $out ); + # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< BEGIN { - $run_time_beg = Maasha::Biopieces::run_time(); - - Maasha::Biopieces::log_biopiece(); + Maasha::Biopieces::status_set(); } END { - Maasha::Biopieces::close_stream( $in ); - Maasha::Biopieces::close_stream( $out ); - - $run_time_end = Maasha::Biopieces::run_time(); - - Maasha::Biopieces::run_time_print( $run_time_beg, $run_time_end, $options ); + Maasha::Biopieces::status_log(); } @@ -90,4 +87,3 @@ END __END__ -