X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fjoin_seq;h=5804624df40bbacc26feea12c16919ca0febd594;hb=5de6112b70b59420b245ce636a8b2e3c90acbe00;hp=ce36e5944a665753c2e43aae8b660a0935dcd81e;hpb=81d8f5f74f0a71bb1483b9525b79160078be117a;p=biopieces.git

diff --git a/bp_bin/join_seq b/bp_bin/join_seq
index ce36e59..5804624 100755
--- a/bp_bin/join_seq
+++ b/bp_bin/join_seq
@@ -38,11 +38,11 @@ casts << {:long=>'delimiter', :short=>'d', :type=>'string', :mandatory=>true, :d
 options = Biopieces.options_parse(ARGV, casts)
 
 sequences = []
-seq = Seq.new(nil, "")
+seq = Seq.new(seq: "")
 
 Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output|
   input.each_record do |record|
-    if record.has_key? :SEQ
+    if record[:SEQ]
       unless seq.seq_name 
         seq.seq_name = record[:SEQ_NAME]
       end