X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fdenoise_seq;h=baa62ad7eb6102e724f7ad7b02d842ceb9d2d2d3;hb=508d11515a4f8ac768829b56486c1b660b8f247e;hp=0129c47f2fb0b081ac888d6583359289feb3da63;hpb=e61e8de1cc4bfb80054174607a81e9d0d47b40d8;p=biopieces.git diff --git a/bp_bin/denoise_seq b/bp_bin/denoise_seq index 0129c47..baa62ad 100755 --- a/bp_bin/denoise_seq +++ b/bp_bin/denoise_seq @@ -72,7 +72,7 @@ Biopieces.open(options[:stream_in], options[:stream_out]) do |input, output| Fasta.open(fasta_file, "w") do |fasta_io| Fastq.open(fastq_file, "w") do |fastq_io| input.each_record do |record| - if record.has_key? :SEQ and record.has_key? :SCORES + if record[:SEQ] and record[:SCORES] entry = Seq.new_bp(record) entry.seq_name = seq_count.to_s