X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bp_bin%2Fcreate_bowtie_index;h=49c1cfdc86fa205e2349f6863d3237f7b4b5c155;hb=7747e486d3339b1fe256513274ca697224aea96a;hp=fa6b99a6a336b1deeef32de23d0794fe89a6085e;hpb=2224c1fb8cbef6483285ba6989a9a09768c15151;p=biopieces.git diff --git a/bp_bin/create_bowtie_index b/bp_bin/create_bowtie_index index fa6b99a..49c1cfd 100755 --- a/bp_bin/create_bowtie_index +++ b/bp_bin/create_bowtie_index @@ -30,9 +30,9 @@ use warnings; use strict; use Maasha::Common; use Maasha::Biopieces; -use Maasha::Bowtie; use Maasha::Filesys; use Maasha::Fasta; +use Maasha::Bowtie; # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< @@ -48,8 +48,6 @@ $options = Maasha::Biopieces::parse_options( ] ); -Maasha::Common::error( qw(Directory already exists: "$options->{ 'directory' }") ) if -d $options->{ 'directory' }; - Maasha::Filesys::dir_create_if_not_exists( $options->{ 'directory' } ); $in = Maasha::Biopieces::read_stream( $options->{ "stream_in" } );