X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=bootstrap.cpp;fp=bootstrap.cpp;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=ce261cead89a50335536e1c165dca793f668ea04;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/bootstrap.cpp b/bootstrap.cpp
deleted file mode 100644
index ce261ce..0000000
--- a/bootstrap.cpp
+++ /dev/null
@@ -1,40 +0,0 @@
-/*
- *  bootstrap.cpp
- *  Dotur
- *
- *  Created by Sarah Westcott on 1/7/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "bootstrap.h"
-
-/***********************************************************************/
-
-EstOutput Bootstrap::getValues(SAbundVector* rank){
-	try {
-		//vector<double> bootData(3,0);
-		data.resize(1,0);
-		double maxRank = (double)rank->getMaxRank();
-		double sampled = rank->getNumSeqs();
-		double sobs = rank->getNumBins();
-
-		double boot = (double)sobs;
-
-		for(int i=1;i<=maxRank;i++){
-			boot += (double)rank->get(i)*pow((1.0-(double)i/(double)sampled),sampled);
-		}
-		
-		data[0] = boot;
-		
-		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
-	
-		return data;
-	}
-	catch(exception& e) {
-		m->errorOut(e, "Bootstrap", "getValues");
-		exit(1);
-	}
-}
-
-/***********************************************************************/